Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015908971.1_cds_XP_016459209.1_52760
CDS Infomation

[gene=LOC107782785] [db_xref=GeneID:107782785] [protein=jacalin-related lectin 3-like isoform X2] [protein_id=XP_016459209.1] [location=complement(join(10483..10779,11047..11268,11384..11419,11693..12178,12262..12507,12590..13087,13209..13421,13497..13499))] [gbkey=CDS]
Sequence

ATGAGTTTCGAGAATCATGGAAAACAGACCATTTCGATTGGGCCATGGGGAGGTGAGAAT
GGATTGCACTGGGATGATGGAGTTTATTCCACCATAAGGCAACTTGAAATAGCTCATGGA
ACAGGAGTTGATTCTCTTAAGGTTGAATATGACAAAAATGGAACCTCAGTATGGTCAGAG
AAGCATGGTGGCAGTGGAGGTGCTAAAACAGACAAGGTACGACTTAATTATCCAGATGAG
TTTCTAACTTGTCTGCATGGATATCATGGTAGCTTACACGAAAGGGGGTCAGTTTTTGTG
CGATCACTTACATTTCAAAGCAACAAAAGGACGTATGGACCATATGGTGTCCAGCAAGGA
ACATATTTCACTCTTCCAATTTCTAGTGGAAAAGTTGTTGGCTTCCATGGAAAATCTGGC
TGGTATCTTGATGCTATTGGAGTATACGTAGAGCCTATTCATAAATCTTTGCCGACTAAT
TCTATTCTTCAGTCTCAGCAACACCATTCTATCGTTCATTCCCAACAAAGTGTTGTCCAA
GGGTTTGAGAATTATGAATACTCAATGATACAAGGAAGTCTCGGTAAAAATTTTGATCTA
ATTGTTGCAGTTAGACGCAAAGATGAGAACAGTAACATTTTACCTCCCACCACACTTTCA
AGACAAACTTCTGGTTCTGATCATGATTCCAGTTCTACTGGACCAAATAAAAAGGTGGAA
ACTATAACCCCTGCCCCTATTGAGAGAGTCCCGTCGAAAAGTGTCAAGGGTGTTGTCACA
TATTGTCCCTGGGGTGGAAGTGGGGGGAGTGTTTTTGATGATGGAATCTATGATGGTGTT
AGGCAAATTTACTTGTCACGCAATGTGGGAATCGTTTCGATAAGAGCTTGCTATGACAAA
AATAGAGAACCAGTTTGGGGAAGCAAAAATGGTGGTACTGGTGGATTTAAAACTGAGAAG
ATAATATTTGATTATCCATCAGAGATTTTGACGCACATCACAGGCTACTATGGACCAGCC
ATGATTATGGGTCCTAACATTATTCAATCACTAACTTTTCATACCACAAAAGGCAAACAT
GGACCTTATGGAGAAGAACAAGGACAACAATTTTCAACCAAATTGAAAGAAGGGATTATT
GTTGGCTTTCATGGGAGGAAAGGATTGTTTCTTGATGCACTTGGTGTTCATGTGTTGGAA
GGAAAAGTTGTTTCATGTTTACCCCCTTCCCCGGCCCCCAACTCCATCAAACCAAGTGCA
GCGTCTGTCCCGTTTTTACCTGCGCCAGCTCCCCCCCAATCAATCAAACCAGATGCAGTA
ACTCTCCCATCTTTACCTGCACCGGCTCCCCCCAAATCCGTCAAACCAAAACCAGCATTT
GTCACTGAGGTTGATGATAGACCACAGTGGTCTTTTAAACTGGGAAAGAAAGGACTCACT
GAGGAGACTAAAAAGGAAAAGAGACAGATAAAATGGAACGGAGGAGTGCAAAGGATAGTG
AAAGATCCAGCACCATATGGACCTGGTCCATGGGGTGGAGAAGGTGGGAAGCCATGGGAT
GATGGAGTATTCACTGGGATCAAACAGATAATACTAACACAATCATCAGAAGGCATTTGC
TGTATCGAAATTGAGTACGATCGAAATGGACAATCTGTTTGGTCAGTAAAACATGGCGCA
AATGCTGGGAAATGCACAAATAGGGTAAAGTTAGAGTATCCTCATGAAGTACTAACTTGC
ATCACTGGATTCTATGGTCCTATAAGCAAAGATATGGGGTTGAAAGTGATAAAATCACTG
ACTTTTCACACTACTAGAAGGAAGTTTGGTCCCTTTGGGGAGGAACTAGGAACATATTTC
ACATCAGCAACAACAGAAGGTAAAGTGGTAGGATTTCATGGGAGGAATGGAATGTATTTG
GATGCAATTGGAGTGCATATGCAACACTGGTTAGGCAATCAGAAAACCTCCAAGCATTCT
CTTATGAAGATGTTCCATTGA

Peptide Sequence

PEP ID

XP_016459209.1
PEP Infomation

PREDICTED: jacalin-related lectin 3-like isoform X2 [Nicotiana tabacum]
Sequence

MSFENHGKQTISIGPWGGENGLHWDDGVYSTIRQLEIAHGTGVDSLKVEYDKNGTSVWSE
KHGGSGGAKTDKVRLNYPDEFLTCLHGYHGSLHERGSVFVRSLTFQSNKRTYGPYGVQQG
TYFTLPISSGKVVGFHGKSGWYLDAIGVYVEPIHKSLPTNSILQSQQHHSIVHSQQSVVQ
GFENYEYSMIQGSLGKNFDLIVAVRRKDENSNILPPTTLSRQTSGSDHDSSSTGPNKKVE
TITPAPIERVPSKSVKGVVTYCPWGGSGGSVFDDGIYDGVRQIYLSRNVGIVSIRACYDK
NREPVWGSKNGGTGGFKTEKIIFDYPSEILTHITGYYGPAMIMGPNIIQSLTFHTTKGKH
GPYGEEQGQQFSTKLKEGIIVGFHGRKGLFLDALGVHVLEGKVVSCLPPSPAPNSIKPSA
ASVPFLPAPAPPQSIKPDAVTLPSLPAPAPPKSVKPKPAFVTEVDDRPQWSFKLGKKGLT
EETKKEKRQIKWNGGVQRIVKDPAPYGPGPWGGEGGKPWDDGVFTGIKQIILTQSSEGIC
CIEIEYDRNGQSVWSVKHGANAGKCTNRVKLEYPHEVLTCITGFYGPISKDMGLKVIKSL
TFHTTRRKFGPFGEELGTYFTSATTEGKVVGFHGRNGMYLDAIGVHMQHWLGNQKTSKHS
LMKMFH

Transcript Sequence

Gene sequence data has not been registered.